EnhancerDB
  1. Home
  2. SNP
  3. rs141879878[chr1:178655385]
Enhancers that have rs141879878[chr1:178655385]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178647285 178660595 enh761
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Lung (A549) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast)
Transcript factors that have rs141879878[chr1:178655385]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178655269 178656599 TCF7L2 GTRD no Colon (HCT116) 21352952
chr1 178655364 178655385 IRF1 JASPAR yes 33438589
chr1 178655371 178655386 FOXP1 JASPAR yes 33438593
chr1 178655375 178655390 FOXP1 JASPAR yes 33438597
chr1 178655378 178655388 HOXB13 JASPAR yes 33438598
chr1 178655382 178655386 YY1 TRANSFAC yes 33438599
Genes associated with rs141879878[chr1:178655385], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More