EnhancerDB
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  3. rs141975929[chr1:200254801]
Enhancers that have rs141975929[chr1:200254801]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs141975929[chr1:200254801]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200253459 200255000 ZNF274 GTRD no Blood (GM12878) 21362707
chr1 200253582 200254861 ZNF274 GTRD no Blood (GM12878) 21362708
chr1 200253596 200255018 ZNF274 GTRD no Blood (GM12878) 21362709
chr1 200253599 200255148 ZNF274 GTRD no Blood (GM12878) 21362711
chr1 200253645 200254942 ZNF274 GTRD no Blood (GM12878) 21362712
chr1 200253657 200255003 ZNF274 GTRD no Blood (GM12878) 21362713
chr1 200253710 200254992 ZNF274 GTRD no Blood (GM12878) 21362715
chr1 200253774 200254902 ZNF274 GTRD no Blood (GM12878) 21362720
chr1 200253787 200254957 ZNF274 GTRD no Blood (GM12878) 21362721
chr1 200253801 200254918 ZNF274 GTRD no Blood (GM12878) 21362722
chr1 200253890 200254831 ZNF274 GTRD no Blood (GM12878) 21362727
chr1 200253913 200255020 ZNF274 GTRD no Blood (GM12878) 21362732
chr1 200253924 200254900 ZNF274 GTRD no Blood (GM12878) 21362733
chr1 200254568 200254928 ZNF274 GTRD no Blood (GM12878) 21362748
chr1 200254622 200254985 ZNF274 GTRD no Blood (GM12878) 21362749
chr1 200254624 200254924 ZNF274 GTRD no Blood (GM12878) 21362750
chr1 200254787 200254804 RARA JASPAR yes 34429048
chr1 200254787 200254804 RXRA JASPAR yes 34429049
chr1 200254799 200254803 LFA1 TRANSFAC yes 34429051
Genes associated with rs141975929[chr1:200254801], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More