EnhancerDB
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  3. rs142006538[chr1:234983558]
Enhancers that have rs142006538[chr1:234983558]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234969905 234989795 enh995
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs142006538[chr1:234983558]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234972028 234984945 ZNF274 GTRD no Bone Marrow (K562) 21398221
chr1 234972028 234984945 ZNF274 GTRD no Bone Marrow (K562) 107882095
chr1 234972028 234984945 ZNF274 GTRD no Bone Marrow (K562) 107882096
chr1 234972028 234984945 ZNF274 GTRD no Bone Marrow (K562) 107882097
chr1 234972028 234984945 ZNF274 GTRD no Bone Marrow (K562) 107882098
chr1 234972028 234984945 ZNF274 GTRD no Bone Marrow (K562) 107882099
chr1 234972028 234984945 ZNF274 GTRD no Bone Marrow (K562) 107882100
chr1 234983011 234990049 ZNF274 GTRD no Blood (GM12878) 21398756
chr1 234983011 234990049 ZNF274 GTRD no Blood (GM12878) 107883104
chr1 234983011 234990049 ZNF274 GTRD no Blood (GM12878) 107883105
chr1 234983011 234990049 ZNF274 GTRD no Blood (GM12878) 107883106
chr1 234983011 234990049 ZNF274 GTRD no Blood (GM12878) 107883107
chr1 234983017 234983723 ZNF274 GTRD no Bone Marrow (K562) 21398757
chr1 234983084 234985006 ZNF274 GTRD no Bone Marrow (K562) 21398758
chr1 234983084 234985006 ZNF274 GTRD no Bone Marrow (K562) 107883108
chr1 234983107 234985879 ZNF274 GTRD no Bone Marrow (K562) 21398759
chr1 234983107 234985879 ZNF274 GTRD no Bone Marrow (K562) 107883109
chr1 234983107 234985879 ZNF274 GTRD no Bone Marrow (K562) 107883110
chr1 234983124 234986041 ZNF274 GTRD no Blood (GM12878) 21398760
chr1 234983124 234986041 ZNF274 GTRD no Blood (GM12878) 107883111
chr1 234983124 234986041 ZNF274 GTRD no Blood (GM12878) 107883112
chr1 234983139 234984938 ZNF274 GTRD no Blood (GM12878) 21398761
chr1 234983159 234985883 ZNF274 GTRD no Blood (GM12878) 21398762
chr1 234983159 234985883 ZNF274 GTRD no Blood (GM12878) 107883113
chr1 234983159 234985883 ZNF274 GTRD no Blood (GM12878) 107883114
chr1 234983397 234984907 ZNF274 GTRD no Blood (GM12878) 21398763
chr1 234983409 234984907 ZNF274 GTRD no Blood (GM12878) 21398764
chr1 234983409 234984928 ZNF274 GTRD no Bone Marrow (K562) 21398765
chr1 234983416 234984989 ZBTB33 GTRD no Lung (A549) 107883115
chr1 234983540 234984874 ZNF274 GTRD no Blood (GM12878) 21398766
chr1 234983545 234983560 FOXA1 JASPAR yes 36320311
chr1 234983545 234984930 ZNF274 GTRD no Blood (GM12878) 21398767
chr1 234983546 234983558 FOXC2 JASPAR yes 36320316
chr1 234983551 234983567 POU4F2 JASPAR yes 36320317
chr1 234983551 234983567 POU4F3 JASPAR yes 36320318
chr1 234983556 234983560 YY1 TRANSFAC yes 36320319
Genes associated with rs142006538[chr1:234983558], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More