-
Home
- SNP
- rs142009179[chr17:48576383]
Enhancers that have rs142009179[chr17:48576383]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
48569165 |
48580715 |
enh86256 |
|
|
Transcript factors that have rs142009179[chr17:48576383]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
48575736
|
48576408
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21769796
|
|
|
chr17
|
48575777
|
48577401
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21769797
|
|
|
chr17
|
48576158
|
48576972
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21769798
|
|
|
chr17
|
48576231
|
48577031
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21769799
|
|
|
chr17
|
48576371
|
48576383
|
PKNOX1
|
JASPAR
|
yes
|
|
54706093
|
|
|
chr17
|
48576371
|
48576383
|
TGIF1
|
JASPAR
|
yes
|
|
54706094
|
|
|
chr17
|
48576371
|
48576384
|
ZBTB18
|
JASPAR
|
yes
|
|
54706095
|
|
Genes associated with rs142009179[chr17:48576383], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |