EnhancerDB
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  3. rs142138563[chr18:52274560]
Enhancers that have rs142138563[chr18:52274560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 52272765 52277075 enh69476
Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs142138563[chr18:52274560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 52274506 52275026 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108337220
chr18 52274545 52274560 NR2C2 JASPAR yes 110720897
chr18 52274549 52274564 TFAP2A JASPAR yes 110720898
chr18 52274549 52274564 TFAP2C JASPAR yes 110720899
chr18 52274552 52274563 TFAP2A JASPAR yes 110720901
chr18 52274552 52274564 TFAP2A JASPAR yes 110720902
chr18 52274552 52274564 TFAP2B JASPAR yes 110720903
chr18 52274552 52274564 TFAP2C JASPAR yes 110720904
chr18 52274553 52274562 TFAP2A JASPAR yes 110720905
Genes associated with rs142138563[chr18:52274560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More