EnhancerDB
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  3. rs142211339[chr1:172612071]
Enhancers that have rs142211339[chr1:172612071]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172604705 172618495 enh27243
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Lung (A549) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Thymus
Transcript factors that have rs142211339[chr1:172612071]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172611964 172612540 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350145
chr1 172612066 172612086 PPARG JASPAR yes 33142792
chr1 172612068 172612075 NKX3-1 JASPAR yes 33142793
chr1 172612071 172612076 GATA1 TRANSFAC yes 33142794
Genes associated with rs142211339[chr1:172612071], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More