EnhancerDB
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  3. rs142229590[chr17:48577963]
Enhancers that have rs142229590[chr17:48577963]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48569165 48580715 enh86256
Stomach Colon (HCT116) Cervix (HeLa-S3) Lung (PC-9)
Transcript factors that have rs142229590[chr17:48577963]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48576495 48579169 TCF7L2 GTRD no Colon (HCT116) 21769802
chr17 48576537 48579317 TCF7L2 GTRD no Colon (HCT116) 21769803
chr17 48577511 48579226 TCF7L2 GTRD no Colon (HCT116) 21769806
chr17 48577512 48578268 TCF7L2 GTRD no Colon (HCT116) 21769807
chr17 48577561 48578324 TCF7L2 GTRD no Colon (HCT116) 21769808
chr17 48577568 48578547 TCF7L2 GTRD no Colon (HCT116) 21769809
chr17 48577572 48579178 TCF7L2 GTRD no Colon (HCT116) 21769810
chr17 48577650 48579059 TCF7L2 GTRD no Colon (HCT116) 21769811
chr17 48577679 48579129 TCF7L2 GTRD no Colon (HCT116) 21769812
chr17 48577706 48578255 TCF7L2 GTRD no Colon (HCT116) 21769813
chr17 48577771 48578239 TCF7L2 GTRD no Colon (HCT116) 21769814
chr17 48577958 48577976 TP53 JASPAR yes 54706350
chr17 48577958 48577976 TP73 JASPAR yes 54706351
Genes associated with rs142229590[chr17:48577963], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More