EnhancerDB
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  3. rs142260973[chr6:24313715]
Enhancers that have rs142260973[chr6:24313715]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 24304885 24318435 enh38922
Prostate (PC-3) Liver (HepG2) Large Intestine Astrocyte Muscle (A673) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs142260973[chr6:24313715]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 24313567 24314043 EP300 UCSC Txn Factor no Conserved 108539067
chr6 24313569 24314034 TCF12 UCSC Txn Factor no Conserved 108539068
chr6 24313576 24314046 GATA3 UCSC Txn Factor no Conserved 108539069
chr6 24313592 24313972 ARID3A UCSC Txn Factor no Conserved 108539070
chr6 24313595 24313997 TEAD4 UCSC Txn Factor no Conserved 108539071
chr6 24313671 24313942 FOXA1 UCSC Txn Factor no Conserved 108539072
chr6 24313674 24313920 FOXA2 UCSC Txn Factor no Conserved 108539073
chr6 24313694 24313715 IRF1 JASPAR yes 100774572
chr6 24313700 24313720 RREB1 JASPAR yes 100774575
chr6 24313700 24313721 IRF1 JASPAR yes 100774576
chr6 24313701 24313716 FOXP1 JASPAR yes 100774578
chr6 24313701 24313722 IRF1 JASPAR yes 100774579
chr6 24313705 24313723 IRF2 JASPAR yes 100774580
chr6 24313706 24313727 IRF1 JASPAR yes 100774581
chr6 24313707 24313952 CEBPB UCSC Txn Factor no Conserved 108539074
chr6 24313708 24313723 STAT2 JASPAR yes 100774583
chr6 24313709 24313723 STAT1 JASPAR yes 100774584
chr6 24313710 24313722 IRF1 JASPAR yes 100774585
chr6 24313715 24313719 YY1 TRANSFAC yes 100774586
Genes associated with rs142260973[chr6:24313715], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More