EnhancerDB
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  3. rs142270962[chr1:28388265]
Enhancers that have rs142270962[chr1:28388265]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28387565 28408035 enh180
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Heart
Transcript factors that have rs142270962[chr1:28388265]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28388262 28388272 SP1 JASPAR yes 27735227
chr1 28388262 28388281 PAX5 JASPAR yes 27735228
chr1 28388265 28388270 SP1 TRANSFAC yes 27735229
Genes associated with rs142270962[chr1:28388265], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More