EnhancerDB
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  3. rs142336161[chr1:200408494]
Enhancers that have rs142336161[chr1:200408494]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200395745 200424875 enh27417
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs142336161[chr1:200408494]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200403827 200409116 AR GTRD no Prostate (PC-3) 21363470
chr1 200406760 200409298 ZNF274 GTRD no Cervix (HeLa-S3) 21363481
chr1 200407168 200412701 ZNF143 GTRD no Epithelial (MCF-7) 21363483
chr1 200408336 200411190 ZNF274 GTRD no Cervix (HeLa-S3) 21363489
chr1 200408425 200409575 ZNF143 GTRD no Epithelial (MCF-7) 21363490
chr1 200408484 200408494 GBX2 JASPAR yes 34447403
chr1 200408484 200408494 GSX2 JASPAR yes 34447404
chr1 200408484 200408494 MNX1 JASPAR yes 34447405
chr1 200408484 200408494 RAX JASPAR yes 34447406
chr1 200408485 200408494 VENTX JASPAR yes 34447413
Genes associated with rs142336161[chr1:200408494], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More