EnhancerDB
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  3. rs142338240[chr17:62275294]
Enhancers that have rs142338240[chr17:62275294]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62272145 62284015 enh32276
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Liver Astrocyte Colon (HCT116) Peripheral Blood (MM.1S) Adrenal Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs142338240[chr17:62275294]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62275282 62275303 IRF1 JASPAR yes 55285443
chr17 62275288 62275303 MEF2C JASPAR yes 55285444
chr17 62275288 62275309 IRF1 JASPAR yes 55285445
chr17 62275290 62275305 STAT2 JASPAR yes 55285446
chr17 62275291 62275295 YY1 TRANSFAC yes 55285447
chr17 62275291 62275305 STAT1 JASPAR yes 55285448
chr17 62275292 62275304 IRF1 JASPAR yes 55285449
chr17 62275292 62275306 IRF7 JASPAR yes 55285450
chr17 62275292 62275306 IRF8 JASPAR yes 55285451
chr17 62275292 62275307 IRF9 JASPAR yes 55285452
Genes associated with rs142338240[chr17:62275294], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More