EnhancerDB
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  3. rs142397566[chr17:60252097]
Enhancers that have rs142397566[chr17:60252097]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60237265 60252315 enh17274
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Large Intestine Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs142397566[chr17:60252097]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 21777818
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 21777819
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280259
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280260
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280261
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280262
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280263
chr17 60249603 60253517 ZNF143 GTRD no Epithelial (MCF-7) 21777859
chr17 60249603 60253517 ZNF143 GTRD no Epithelial (MCF-7) 108280323
chr17 60250994 60255066 ZNF143 GTRD no Epithelial (MCF-7) 21777896
chr17 60250994 60255066 ZNF143 GTRD no Epithelial (MCF-7) 21777897
chr17 60252087 60252101 MTF1 JASPAR yes 55189817
chr17 60252087 60252105 ESR2 JASPAR yes 55189818
chr17 60252088 60252105 ESR1 JASPAR yes 55189819
Genes associated with rs142397566[chr17:60252097], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More