EnhancerDB
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  3. rs142488858[chr1:40847612]
Enhancers that have rs142488858[chr1:40847612]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40843025 40858135 enh273
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Thymus Heart
chr1 40847285 40847634 vista1292
VISTA
Transcript factors that have rs142488858[chr1:40847612]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40846927 40849056 ZNF274 GTRD no Bone Marrow (K562) 107802922
chr1 40847612 40847627 FOXA1 JASPAR yes 28326665
chr1 40847612 40847627 FOXA1 JASPAR yes 118276996
Genes associated with rs142488858[chr1:40847612], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More