EnhancerDB
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  3. rs142538379[chr1:220550115]
Enhancers that have rs142538379[chr1:220550115]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220534493 220550315 enh12681
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs142538379[chr1:220550115]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220550110 220550121 HOXC13 JASPAR yes 35490237
chr1 220550111 220550121 HOXC10 JASPAR yes 35490238
Genes associated with rs142538379[chr1:220550115], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More