EnhancerDB
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  3. rs142539137[chr5:172192159]
Enhancers that have rs142539137[chr5:172192159]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172182745 172195855 enh8880
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs142539137[chr5:172192159]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 107693851
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537470
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537471
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537472
chr5 172192145 172192160 LEF1 JASPAR yes 67824119
chr5 172192146 172192160 TCF7L2 JASPAR yes 67824120
chr5 172192155 172192170 ZIC3 JASPAR yes 67824123
chr5 172192155 172192170 ZIC4 JASPAR yes 67824124
chr5 172192156 172192170 ZIC1 JASPAR yes 67824125
Genes associated with rs142539137[chr5:172192159], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More