EnhancerDB
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  3. rs142541658[chr1:200411958]
Enhancers that have rs142541658[chr1:200411958]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200395745 200424875 enh27417
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs142541658[chr1:200411958]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200407168 200412701 ZNF143 GTRD no Epithelial (MCF-7) 21363483
chr1 200408739 200412574 ZNF143 GTRD no Epithelial (MCF-7) 21363494
chr1 200408953 200411978 ZNF143 GTRD no Epithelial (MCF-7) 21363500
chr1 200411516 200412317 ZNF143 GTRD no Epithelial (MCF-7) 21363545
chr1 200411687 200412007 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363548
chr1 200411777 200412281 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363549
chr1 200411878 200412274 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363550
chr1 200411884 200412268 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363551
chr1 200411905 200412249 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363552
chr1 200411911 200412241 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363553
chr1 200411922 200412262 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363554
chr1 200411950 200412270 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363555
chr1 200411951 200412211 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363556
chr1 200411958 200411966 RHOXF1 JASPAR yes 34448012
Genes associated with rs142541658[chr1:200411958], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More