EnhancerDB
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  3. rs142542291[chr5:90570561]
Enhancers that have rs142542291[chr5:90570561]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90560003 90595415 enh22426
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus
Transcript factors that have rs142542291[chr5:90570561]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90570554 90570569 FOXP1 JASPAR yes 64185544
chr5 90570556 90570571 FOXP1 JASPAR yes 64185545
chr5 90570556 90570571 MEF2C JASPAR yes 64185546
chr5 90570556 90570577 IRF1 JASPAR yes 64185547
chr5 90570558 90570562 TEAD2 TRANSFAC yes 64185548
chr5 90570558 90570563 TBP TRANSFAC yes 64185549
chr5 90570558 90570564 TFIID TRANSFAC yes 64185550
chr5 90570558 90570573 FOXP1 JASPAR yes 64185551
chr5 90570559 90570574 FOXP1 JASPAR yes 64185552
chr5 90570559 90570580 IRF1 JASPAR yes 64185553
chr5 90570560 90570566 TBP TRANSFAC yes 64185554
chr5 90570560 90570575 FOXP1 JASPAR yes 64185555
Genes associated with rs142542291[chr5:90570561], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More