EnhancerDB
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Enhancers that have rs142549876[chr1:205505802]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205502445 205516735 enh12593
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Astrocyte Lung Stomach Placenta Lung (PC-9) Pancreas Heart
Transcript factors that have rs142549876[chr1:205505802]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205503307 205506463 ZNF143 GTRD no Epithelial (MCF-7) 21372016
chr1 205503408 205506432 ZNF143 GTRD no Epithelial (MCF-7) 21372018
chr1 205503765 205506045 ZNF143 GTRD no Epithelial (MCF-7) 21372019
chr1 205503792 205506453 ZNF274 GTRD no Cervix (HeLa-S3) 21372020
chr1 205503881 205507307 ZNF274 GTRD no Cervix (HeLa-S3) 21372022
chr1 205503991 205506056 ZNF143 GTRD no Epithelial (MCF-7) 21372023
chr1 205504005 205506720 ZNF143 GTRD no Epithelial (MCF-7) 21372024
chr1 205504071 205506567 ZNF143 GTRD no Epithelial (MCF-7) 21372026
chr1 205504077 205506404 ZNF274 GTRD no Cervix (HeLa-S3) 21372027
chr1 205504091 205507176 ZNF143 GTRD no Epithelial (MCF-7) 21372028
chr1 205504094 205506044 ZNF143 GTRD no Epithelial (MCF-7) 21372029
chr1 205504094 205506553 ZNF143 GTRD no Epithelial (MCF-7) 21372030
chr1 205504129 205506204 ZNF143 GTRD no Epithelial (MCF-7) 21372031
chr1 205504180 205506013 ZNF274 GTRD no Cervix (HeLa-S3) 21372034
chr1 205504290 205506700 ZNF143 GTRD no Epithelial (MCF-7) 21372036
chr1 205504519 205506229 ZNF143 GTRD no Epithelial (MCF-7) 21372038
chr1 205504550 205506566 ZNF143 GTRD no Epithelial (MCF-7) 21372040
chr1 205505495 205506657 ZNF143 GTRD no Epithelial (MCF-7) 21372050
chr1 205505659 205506741 ZNF143 GTRD no Epithelial (MCF-7) 21372051
chr1 205505705 205506640 ZNF143 GTRD no Epithelial (MCF-7) 21372052
chr1 205505710 205506674 ZNF143 GTRD no Epithelial (MCF-7) 21372053
chr1 205505759 205506500 ZNF274 GTRD no Cervix (HeLa-S3) 21372054
chr1 205505783 205506502 ZNF143 GTRD no Epithelial (MCF-7) 21372055
chr1 205505787 205506263 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21372056
chr1 205505789 205505809 ESR1 JASPAR yes 34768259
chr1 205505791 205505811 PPARG JASPAR yes 34768260
chr1 205505792 205506256 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21372057
chr1 205505792 205506655 ZNF143 GTRD no Epithelial (MCF-7) 21372058
chr1 205505794 205506654 ZNF143 GTRD no Epithelial (MCF-7) 21372059
chr1 205505800 205505804 NFE TRANSFAC yes 34768261
chr1 205505801 205505806 GATA2 JASPAR yes 34768262
Genes associated with rs142549876[chr1:205505802], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More