EnhancerDB
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  3. rs142569532[chr1:90339564]
Enhancers that have rs142569532[chr1:90339564]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90326658 90341655 enh483
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Liver Astrocyte Lung (PC-9) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs142569532[chr1:90339564]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90339556 90339572 RFX2 JASPAR yes 30628165
chr1 90339556 90339572 RFX3 JASPAR yes 30628166
chr1 90339556 90339572 RFX4 JASPAR yes 30628167
chr1 90339556 90339572 RFX5 JASPAR yes 30628168
chr1 90339557 90339576 RFX2 JASPAR yes 30628169
chr1 90339563 90339578 IRF9 JASPAR yes 30628170
chr1 90339564 90339578 IRF7 JASPAR yes 30628171
Genes associated with rs142569532[chr1:90339564], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More