EnhancerDB
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  3. rs142689028[chr1:172945559]
Enhancers that have rs142689028[chr1:172945559]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172934137 172951875 enh12379
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Thymus Stomach
Transcript factors that have rs142689028[chr1:172945559]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172945266 172945642 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21350813
chr1 172945284 172945560 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21350814
chr1 172945294 172945594 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21350815
chr1 172945301 172945681 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21350816
chr1 172945311 172945571 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21350817
chr1 172945362 172945906 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21350820
chr1 172945451 172945741 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21350821
chr1 172945467 172945797 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350822
chr1 172945503 172945847 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350823
chr1 172945505 172945845 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350824
chr1 172945511 172945841 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350825
chr1 172945551 172945566 MEF2C JASPAR yes 33174233
chr1 172945552 172945567 MEF2A JASPAR yes 33174234
Genes associated with rs142689028[chr1:172945559], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More