EnhancerDB
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  3. rs142828542[chr17:57374856]
Enhancers that have rs142828542[chr17:57374856]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57362545 57379195 enh17255
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs142828542[chr17:57374856]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57374381 57374951 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21774604
chr17 57374397 57374867 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21774605
chr17 57374435 57374931 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21774606
chr17 57374439 57377190 ZNF143 GTRD no Epithelial (MCF-7) 21774607
chr17 57374583 57376308 ZNF274 GTRD no Bone Marrow (K562) 21774608
chr17 57374599 57376885 ZNF274 GTRD no Cervix (HeLa-S3) 21774610
chr17 57374614 57376828 ZNF143 GTRD no Epithelial (MCF-7) 21774612
chr17 57374625 57374925 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21774613
chr17 57374714 57377055 ZNF143 GTRD no Epithelial (MCF-7) 21774614
chr17 57374753 57375124 ZNF143 GTRD no Epithelial (MCF-7) 21774615
chr17 57374781 57377032 ZNF143 GTRD no Epithelial (MCF-7) 21774616
chr17 57374788 57377011 ZNF143 GTRD no Epithelial (MCF-7) 21774617
chr17 57374804 57376687 ZNF274 GTRD no Cervix (HeLa-S3) 21774618
chr17 57374813 57376709 ZNF143 GTRD no Epithelial (MCF-7) 21774619
chr17 57374827 57376982 ZNF143 GTRD no Epithelial (MCF-7) 21774620
chr17 57374852 57376834 ZNF274 GTRD no Cervix (HeLa-S3) 21774621
Genes associated with rs142828542[chr17:57374856], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More