Enhancers that have rs142977409[chr1:5778536]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 5775905 5784145 enh11437

Transcript factors that have rs142977409[chr1:5778536]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 5778534 5778545 CDX2 JASPAR yes 26368060
chr1 5778535 5778546 HOXA10 JASPAR yes 26368061
chr1 5778536 5778545 CDX1 JASPAR yes 26368062
chr1 5778536 5778546 HOXA13 JASPAR yes 26368063
chr1 5778536 5778546 HOXB13 JASPAR yes 26368064
chr1 5778536 5778546 HOXD13 JASPAR yes 26368065
chr1 5778536 5778551 MEF2C JASPAR yes 26368066

Genes associated with rs142977409[chr1:5778536], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More