EnhancerDB
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  3. rs143162039[chr1:42181554]
Enhancers that have rs143162039[chr1:42181554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42174680 42197130 enh289
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myotube) Thymus Heart
Transcript factors that have rs143162039[chr1:42181554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42181543 42181564 IRF1 JASPAR yes 28412953
chr1 42181545 42181560 IRF9 JASPAR yes 28412954
chr1 42181546 42181560 IRF7 JASPAR yes 28412955
chr1 42181546 42181560 IRF8 JASPAR yes 28412956
chr1 42181548 42181560 IRF1 JASPAR yes 28412957
Genes associated with rs143162039[chr1:42181554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More