EnhancerDB
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  3. rs143220889[chr1:200400657]
Enhancers that have rs143220889[chr1:200400657]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200395745 200424875 enh27417
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs143220889[chr1:200400657]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200397423 200403660 AR GTRD no Prostate (PC-3) 21363463
chr1 200397423 200403660 AR GTRD no Prostate (PC-3) 107855280
chr1 200400253 200401136 ZNF143 GTRD no Epithelial (MCF-7) 21363466
chr1 200400456 200401313 ZNF143 GTRD no Epithelial (MCF-7) 21363467
chr1 200400623 200401063 ZNF143 GTRD no Epithelial (MCF-7) 21363468
chr1 200400655 200400660 SP1 TRANSFAC yes 34446219
Genes associated with rs143220889[chr1:200400657], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More