EnhancerDB
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  3. rs143238515[chr1:116920323]
Enhancers that have rs143238515[chr1:116920323]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116912865 116924675 enh582
Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs143238515[chr1:116920323]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116918155 116921194 ZNF143 GTRD no Epithelial (MCF-7) 107824056
chr1 116918155 116921194 ZNF143 GTRD no Epithelial (MCF-7) 107824057
chr1 116918155 116921194 ZNF143 GTRD no Epithelial (MCF-7) 107824058
chr1 116918258 116920754 ZNF274 GTRD no Bone Marrow (K562) 107824059
chr1 116918258 116920754 ZNF274 GTRD no Bone Marrow (K562) 107824060
chr1 116918258 116920754 ZNF274 GTRD no Bone Marrow (K562) 107824061
chr1 116918416 116920356 ZNF274 GTRD no Bone Marrow (K562) 107824062
chr1 116918416 116920356 ZNF274 GTRD no Bone Marrow (K562) 107824063
chr1 116918553 116920595 ZNF143 GTRD no Epithelial (MCF-7) 107824064
chr1 116918553 116920595 ZNF143 GTRD no Epithelial (MCF-7) 107824065
chr1 116918553 116920595 ZNF143 GTRD no Epithelial (MCF-7) 107824066
chr1 116918652 116920800 ZNF274 GTRD no Bone Marrow (K562) 107824073
chr1 116918652 116920800 ZNF274 GTRD no Bone Marrow (K562) 107824074
chr1 116918652 116920800 ZNF274 GTRD no Bone Marrow (K562) 107824075
chr1 116918836 116920686 ZNF274 GTRD no Bone Marrow (K562) 107824091
chr1 116918836 116920686 ZNF274 GTRD no Bone Marrow (K562) 107824092
chr1 116919351 116920378 ZNF143 GTRD no Epithelial (MCF-7) 107824132
chr1 116919351 116920378 ZNF143 GTRD no Epithelial (MCF-7) 107824133
chr1 116919426 116920476 ZNF143 GTRD no Epithelial (MCF-7) 107824134
chr1 116919426 116920476 ZNF143 GTRD no Epithelial (MCF-7) 107824135
chr1 116919429 116920556 ZNF143 GTRD no Epithelial (MCF-7) 107824136
chr1 116919429 116920556 ZNF143 GTRD no Epithelial (MCF-7) 107824137
chr1 116919434 116920481 ZNF143 GTRD no Epithelial (MCF-7) 107824138
chr1 116919434 116920481 ZNF143 GTRD no Epithelial (MCF-7) 107824139
chr1 116919444 116920453 ZNF143 GTRD no Epithelial (MCF-7) 107824140
chr1 116919444 116920453 ZNF143 GTRD no Epithelial (MCF-7) 107824141
chr1 116919450 116920394 ZNF274 GTRD no Bone Marrow (K562) 107824142
chr1 116919450 116920394 ZNF274 GTRD no Bone Marrow (K562) 107824143
chr1 116919451 116920373 ZNF143 GTRD no Epithelial (MCF-7) 107824144
chr1 116919535 116920387 ZBTB33 GTRD no Lung (A549) 107824145
chr1 116919535 116920387 ZBTB33 GTRD no Lung (A549) 107824146
chr1 116919603 116920411 ZNF143 GTRD no Epithelial (MCF-7) 107824147
chr1 116919640 116920442 ZNF143 GTRD no Epithelial (MCF-7) 107824148
chr1 116919667 116920466 ZNF143 GTRD no Epithelial (MCF-7) 107824149
chr1 116919673 116920404 ZNF274 GTRD no Cervix (HeLa-S3) 21332361
chr1 116919673 116920404 ZNF274 GTRD no Cervix (HeLa-S3) 107824150
chr1 116919803 116920413 ZBTB33 GTRD no Lung (A549) 107824151
chr1 116919999 116920435 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21332362
chr1 116919999 116920435 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824152
chr1 116920024 116920829 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21332363
chr1 116920024 116920829 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824153
chr1 116920024 116920999 POLR2A UCSC Txn Factor no Conserved 107824154
chr1 116920042 116920643 ZNF274 GTRD no Bone Marrow (K562) 107824155
chr1 116920089 116920485 ZNF274 GTRD no Blood (GM12878) 21332364
chr1 116920089 116920485 ZNF274 GTRD no Blood (GM12878) 107824156
chr1 116920197 116920697 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21332365
chr1 116920197 116920697 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824157
chr1 116920252 116920516 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21332366
chr1 116920252 116920516 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824158
chr1 116920262 116920634 ZNF274 GTRD no Bone Marrow (K562) 107824159
chr1 116920270 116920494 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21332367
chr1 116920270 116920494 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824160
chr1 116920311 116920641 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21332368
chr1 116920311 116920641 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824161
chr1 116920314 116920328 BATF3 JASPAR yes 31802318
chr1 116920320 116920950 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21332369
chr1 116920320 116920950 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824162
Genes associated with rs143238515[chr1:116920323], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More