EnhancerDB
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  3. rs143353795[chr17:42661134]
Enhancers that have rs143353795[chr17:42661134]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42659396 42669330 enh32202
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Astrocyte Bone (Osteoblast) Lung (A549) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Heart
Transcript factors that have rs143353795[chr17:42661134]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42660167 42661205 ZNF143 GTRD no Epithelial (MCF-7) 21762651
chr17 42660181 42662118 ZBTB33 GTRD no Lung (A549) 21762652
chr17 42660218 42661554 ZBTB33 GTRD no Lung (A549) 21762653
chr17 42660230 42661173 ZBTB33 GTRD no Lung (A549) 21762654
chr17 42660242 42661167 ZNF143 GTRD no Epithelial (MCF-7) 21762655
chr17 42660283 42661329 ZBTB33 GTRD no Lung (A549) 21762656
chr17 42660291 42661466 ZBTB33 GTRD no Brain (SK-N-SH) 21762657
chr17 42660299 42661174 ZNF143 GTRD no Epithelial (MCF-7) 21762658
chr17 42660307 42661449 ZNF143 GTRD no Epithelial (MCF-7) 21762659
chr17 42660326 42661313 ZBTB33 GTRD no Brain (SK-N-SH) 21762661
chr17 42660348 42661356 ZBTB33 GTRD no Brain (SK-N-SH) 21762662
chr17 42660349 42661271 ZBTB33 GTRD no Brain (SK-N-SH) 21762663
chr17 42660359 42661206 ZBTB33 GTRD no Brain (SK-N-SH) 21762664
chr17 42660388 42661302 ZBTB33 GTRD no Lung (A549) 21762665
chr17 42660403 42661252 ZBTB33 GTRD no Brain (SK-N-SH) 21762666
chr17 42660413 42661307 ZBTB33 GTRD no Brain (SK-N-SH) 21762667
chr17 42660451 42661180 ZBTB33 GTRD no Lung (A549) 21762669
chr17 42660464 42661157 ZBTB33 GTRD no Lung (A549) 21762670
chr17 42660476 42661470 ZBTB33 GTRD no Brain (SK-N-SH) 21762671
chr17 42660486 42661253 ZNF143 GTRD no Epithelial (MCF-7) 21762672
chr17 42660538 42661314 ZBTB33 GTRD no Brain (SK-N-SH) 21762673
chr17 42660589 42661193 ZBTB33 GTRD no Brain (SK-N-SH) 21762675
chr17 42660599 42661257 ZNF143 GTRD no Epithelial (MCF-7) 21762676
chr17 42660616 42661202 ZBTB33 GTRD no Lung (A549) 21762678
chr17 42660638 42661144 ZNF143 GTRD no Epithelial (MCF-7) 21762681
chr17 42660645 42661202 ZBTB33 GTRD no Brain (SK-N-SH) 21762682
chr17 42660676 42661211 ZBTB33 GTRD no Brain (SK-N-SH) 21762684
chr17 42660677 42661344 ZBTB33 GTRD no Brain (SK-N-SH) 21762685
chr17 42660699 42661175 ZBTB33 GTRD no Brain (SK-N-SH) 21762688
chr17 42661128 42661139 PHOX2A JASPAR yes 54407517
chr17 42661131 42661141 ALX3 JASPAR yes 54407518
chr17 42661131 42661141 EN2 JASPAR yes 54407519
chr17 42661131 42661141 ESX1 JASPAR yes 54407520
chr17 42661131 42661141 GBX2 JASPAR yes 54407521
chr17 42661131 42661141 GSX1 JASPAR yes 54407522
chr17 42661131 42661141 GSX2 JASPAR yes 54407523
chr17 42661131 42661141 LBX2 JASPAR yes 54407524
chr17 42661131 42661141 LHX2 JASPAR yes 54407525
chr17 42661132 42661136 H1TF2 TRANSFAC yes 54407526
chr17 42661132 42661136 NFE TRANSFAC yes 54407527
chr17 42661132 42661136 SRF TRANSFAC yes 54407528
chr17 42661132 42661140 BARX1 JASPAR yes 54407529
chr17 42661132 42661140 BSX JASPAR yes 54407530
chr17 42661132 42661140 DLX6 JASPAR yes 54407531
chr17 42661132 42661140 ISX JASPAR yes 54407532
chr17 42661132 42661140 LBX1 JASPAR yes 54407533
chr17 42661132 42661140 LHX9 JASPAR yes 54407534
chr17 42661132 42661140 MSX1 JASPAR yes 54407535
chr17 42661132 42661140 MSX2 JASPAR yes 54407536
chr17 42661132 42661140 NKX6-2 JASPAR yes 54407537
chr17 42661132 42661140 PRRX1 JASPAR yes 54407538
chr17 42661132 42661140 RAX2 JASPAR yes 54407539
chr17 42661132 42661140 SHOX JASPAR yes 54407540
chr17 42661132 42661140 UNCX JASPAR yes 54407541
Genes associated with rs143353795[chr17:42661134], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More