EnhancerDB
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Enhancers that have rs143471853[chr1:172718116]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172711957 172718375 enh730
Prostate (PC-3) Large Intestine Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Blood (OCI-LY7) Lung (A549) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs143471853[chr1:172718116]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172717475 172718162 ZNF143 GTRD no Epithelial (MCF-7) 21350241
chr1 172717502 172718293 ZBTB33 GTRD no Lung (A549) 21350242
chr1 172717512 172718364 ZBTB33 GTRD no Lung (A549) 21350243
chr1 172717539 172718143 ZNF143 GTRD no Epithelial (MCF-7) 21350244
chr1 172717562 172718257 ZBTB33 GTRD no Lung (A549) 21350246
chr1 172717562 172718272 ZBTB33 GTRD no Lung (A549) 21350247
chr1 172717567 172718172 ZBTB33 GTRD no Lung (A549) 21350248
chr1 172717598 172718263 ZBTB33 GTRD no Lung (A549) 21350250
chr1 172717614 172718175 ZBTB33 GTRD no Lung (A549) 21350251
chr1 172717667 172718157 ZBTB33 GTRD no Lung (A549) 21350252
chr1 172718116 172718121 SP1 TRANSFAC yes 33151333
Genes associated with rs143471853[chr1:172718116], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More