EnhancerDB
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  3. rs143508466[chr16:3868885]
Enhancers that have rs143508466[chr16:3868885]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 3866625 3877475 enh3859
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Brain (SK-N-SH) Blood (GM12878) Thyroid Breast Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Blood (T-cell) Heart
Transcript factors that have rs143508466[chr16:3868885]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 3868875 3868885 SP1 JASPAR yes 9231227
chr16 3868880 3868891 NFKB1 JASPAR yes 9231228
chr16 3868881 3868886 SP1 TRANSFAC yes 9231229
chr16 3868883 3868897 GLIS2 JASPAR yes 9231230
chr16 3868883 3868897 GLIS3 JASPAR yes 9231231
Genes associated with rs143508466[chr16:3868885], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More