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- rs143520584[chr1:28628316]
Enhancers that have rs143520584[chr1:28628316]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
28620565 |
28631035 |
enh11678 |
|
|
Transcript factors that have rs143520584[chr1:28628316]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
28628302
|
28628317
|
HNF1A
|
JASPAR
|
yes
|
|
27757739
|
|
|
chr1
|
28628307
|
28628319
|
MYBL1
|
JASPAR
|
yes
|
|
27757741
|
|
|
chr1
|
28628310
|
28628331
|
IRF1
|
JASPAR
|
yes
|
|
27757743
|
|
|
chr1
|
28628312
|
28628327
|
PRDM1
|
JASPAR
|
yes
|
|
27757745
|
|
|
chr1
|
28628312
|
28628327
|
STAT2
|
JASPAR
|
yes
|
|
27757746
|
|
|
chr1
|
28628315
|
28628330
|
FOXP1
|
JASPAR
|
yes
|
|
27757747
|
|
|
chr1
|
28628316
|
28628331
|
FOXP1
|
JASPAR
|
yes
|
|
27757748
|
|
Genes associated with rs143520584[chr1:28628316], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr1
|
27992572
|
27998729
|
-
|
IFI6
|
ENSG00000126709.10
|
27998729
|
629587
|
Heart
|
0.00375536
|
395
|
|
|
chr1
|
28199055
|
28213196
|
+
|
THEMIS2
|
ENSG00000130775.11
|
28199055
|
415120
|
Liver
|
0.402444
|
400
|
|