EnhancerDB
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  3. rs143778272[chr1:38387900]
Enhancers that have rs143778272[chr1:38387900]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 38378525 38395175 enh258
Bone Marrow (K562) Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Placenta Blood (Karpas-422) Thymus Stomach
Transcript factors that have rs143778272[chr1:38387900]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 38387889 38387900 CDX2 JASPAR yes 28188457
chr1 38387890 38387901 HOXA10 JASPAR yes 28188458
chr1 38387891 38387900 CDX1 JASPAR yes 28188459
chr1 38387891 38387901 HOXA13 JASPAR yes 28188460
chr1 38387891 38387901 HOXB13 JASPAR yes 28188461
chr1 38387891 38387901 HOXD13 JASPAR yes 28188462
chr1 38387891 38387906 MEF2C JASPAR yes 28188463
chr1 38387892 38387907 MEF2A JASPAR yes 28188464
chr1 38387893 38387905 FOXC2 JASPAR yes 28188465
chr1 38387893 38387905 MEF2A JASPAR yes 28188466
chr1 38387893 38387905 MEF2B JASPAR yes 28188467
chr1 38387893 38387905 MEF2D JASPAR yes 28188468
chr1 38387894 38387904 MEF2A JASPAR yes 28188469
chr1 38387895 38387909 FOXF2 JASPAR yes 28188470
chr1 38387895 38387909 ONECUT2 JASPAR yes 28188471
chr1 38387895 38387909 ONECUT3 JASPAR yes 28188472
chr1 38387895 38387910 FOXP1 JASPAR yes 28188473
chr1 38387896 38387911 FOXA1 JASPAR yes 28188474
chr1 38387897 38387908 FOXB1 JASPAR yes 28188475
chr1 38387897 38387908 FOXC1 JASPAR yes 28188476
chr1 38387897 38387909 FOXC2 JASPAR yes 28188477
chr1 38387898 38387910 FOXI1 JASPAR yes 28188478
chr1 38387899 38387914 PRDM1 JASPAR yes 28188479
Genes associated with rs143778272[chr1:38387900], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More