EnhancerDB
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  3. rs143796352[chr12:108998816]
Enhancers that have rs143796352[chr12:108998816]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 108997229 109015819 enh14971
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs143796352[chr12:108998816]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 108998811 108998826 PRDM1 JASPAR yes 123605422
chr12 108998812 108998826 TCF7L2 JASPAR yes 123605423
chr12 108998812 108998827 LEF1 JASPAR yes 123605424
chr12 108998814 108998822 GATA3 JASPAR yes 123605425
Genes associated with rs143796352[chr12:108998816], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More