EnhancerDB
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  3. rs144162678[chr1:172611550]
Enhancers that have rs144162678[chr1:172611550]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172604705 172618495 enh27243
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Lung (A549) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Thymus
Transcript factors that have rs144162678[chr1:172611550]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172611190 172611857 ZNF274 GTRD no Bone Marrow (K562) 21350144
chr1 172611542 172611562 ESR1 JASPAR yes 33142729
chr1 172611545 172611554 THAP1 JASPAR yes 33142730
chr1 172611545 172611563 ESR2 JASPAR yes 33142731
chr1 172611546 172611563 ESR1 JASPAR yes 33142732
chr1 172611546 172611564 ESR2 JASPAR yes 33142733
chr1 172611547 172611562 ESR2 JASPAR yes 33142734
chr1 172611548 172611552 LFA1 TRANSFAC yes 33142735
Genes associated with rs144162678[chr1:172611550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More