EnhancerDB
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  3. rs144177928[chr17:55598474]
Enhancers that have rs144177928[chr17:55598474]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55591785 55606415 enh4489
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Prostate (RWPE1) Liver Astrocyte Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Uterus Thymus Heart
Transcript factors that have rs144177928[chr17:55598474]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55598463 55598484 REST JASPAR yes 54963975
chr17 55598464 55598483 REST JASPAR yes 54963976
chr17 55598465 55598477 NHLH1 JASPAR yes 54963977
chr17 55598466 55598476 NHLH1 JASPAR yes 54963978
chr17 55598474 55598479 GATA2 JASPAR yes 54963979
Genes associated with rs144177928[chr17:55598474], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More