EnhancerDB
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  3. rs144769568[chr1:220537375]
Enhancers that have rs144769568[chr1:220537375]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220534493 220550315 enh12681
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs144769568[chr1:220537375]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220537315 220537785 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21381678
chr1 220537360 220537378 ESR2 JASPAR yes 35488422
chr1 220537361 220537376 ESR2 JASPAR yes 35488423
chr1 220537364 220537375 USF1 JASPAR yes 35488436
chr1 220537364 220537375 USF2 JASPAR yes 35488437
chr1 220537365 220537375 MAX JASPAR yes 35488439
chr1 220537370 220537380 RORA JASPAR yes 35488443
chr1 220537373 220537383 BHLHE22 JASPAR yes 35488444
chr1 220537373 220537383 NEUROD2 JASPAR yes 35488445
chr1 220537373 220537383 OLIG2 JASPAR yes 35488446
chr1 220537373 220537383 OLIG3 JASPAR yes 35488447
Genes associated with rs144769568[chr1:220537375], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More