EnhancerDB
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  3. rs145707600[chr1:42244828]
Enhancers that have rs145707600[chr1:42244828]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs145707600[chr1:42244828]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42244819 42244830 E2F6 JASPAR yes 28421614
chr1 42244823 42244844 ZNF263 JASPAR yes 28421615
chr1 42244824 42244834 ZNF740 JASPAR yes 28421616
chr1 42244825 42244839 ZIC1 JASPAR yes 28421617
chr1 42244825 42244840 ZIC3 JASPAR yes 28421618
chr1 42244828 42244834 SP1 TRANSFAC yes 28421619
chr1 42244828 42244842 ZIC1 JASPAR yes 28421620
chr1 42244828 42244843 ZIC3 JASPAR yes 28421621
Genes associated with rs145707600[chr1:42244828], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More