EnhancerDB
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  3. rs146185425[chr1:200360641]
Enhancers that have rs146185425[chr1:200360641]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200355797 200367837 enh870
Placenta Neural Stem Cells (H9) Blood (Karpas-422)
Transcript factors that have rs146185425[chr1:200360641]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200360214 200360724 SOX2 GTRD no Neural Stem Cells (H9) 21363443
chr1 200360338 200360736 SOX2 GTRD no Neural Stem Cells (H9) 21363444
chr1 200360356 200360803 SOX2 GTRD no Neural Stem Cells (H9) 21363445
chr1 200360629 200360641 POU2F1 JASPAR yes 34443910
chr1 200360629 200360644 FOXP1 JASPAR yes 34443911
chr1 200360630 200360641 FOXA1 JASPAR yes 34443912
chr1 200360630 200360645 FOXA1 JASPAR yes 34443913
chr1 200360631 200360642 FOXB1 JASPAR yes 34443915
chr1 200360631 200360642 FOXC1 JASPAR yes 34443916
chr1 200360631 200360643 FOXC2 JASPAR yes 34443917
chr1 200360632 200360643 FOXP2 JASPAR yes 34443918
chr1 200360633 200360641 FOXO3 JASPAR yes 34443919
chr1 200360634 200360641 FOXD2 JASPAR yes 34443920
chr1 200360634 200360641 FOXI1 JASPAR yes 34443921
chr1 200360634 200360641 FOXL1 JASPAR yes 34443922
chr1 200360634 200360641 FOXO4 JASPAR yes 34443923
chr1 200360634 200360641 FOXO6 JASPAR yes 34443924
chr1 200360634 200360641 FOXP3 JASPAR yes 34443925
chr1 200360634 200360642 FOXD1 JASPAR yes 34443926
chr1 200360634 200360642 FOXG1 JASPAR yes 34443927
chr1 200360634 200360642 FOXO3 JASPAR yes 34443928
chr1 200360637 200360652 SOX21 JASPAR yes 34443929
chr1 200360637 200360653 SOX4 JASPAR yes 34443930
Genes associated with rs146185425[chr1:200360641], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More