EnhancerDB
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  3. rs146380484[chr1:200307210]
Enhancers that have rs146380484[chr1:200307210]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200297972 200315295 enh868
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs146380484[chr1:200307210]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200306989 200307269 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21363110
chr1 200307098 200308110 ZNF143 GTRD no Epithelial (MCF-7) 21363111
chr1 200307149 200307928 ZNF143 GTRD no Epithelial (MCF-7) 21363112
chr1 200307191 200308023 ZNF143 GTRD no Epithelial (MCF-7) 21363113
chr1 200307198 200308198 ZNF143 GTRD no Epithelial (MCF-7) 21363114
chr1 200307203 200307218 LEF1 JASPAR yes 34436481
chr1 200307204 200307222 RARA JASPAR yes 34436482
Genes associated with rs146380484[chr1:200307210], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More