EnhancerDB
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  3. rs146544665[chr1:117039089]
Enhancers that have rs146544665[chr1:117039089]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs146544665[chr1:117039089]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117038370 117039179 ZNF143 GTRD no Epithelial (MCF-7) 21333105
chr1 117038984 117039360 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21333111
chr1 117039028 117039368 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21333112
chr1 117039056 117039380 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333113
chr1 117039074 117039338 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21333114
chr1 117039079 117039098 REST JASPAR yes 31813870
Genes associated with rs146544665[chr1:117039089], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More