EnhancerDB
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Enhancers that have rs1466544[chr16:85398303]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85390172 85421515 enh16868
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Heart
Transcript factors that have rs1466544[chr16:85398303]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85392623 85398658 ZNF143 GTRD no Epithelial (MCF-7) 21724055
chr16 85392623 85398658 ZNF143 GTRD no Epithelial (MCF-7) 108213889
chr16 85392623 85398658 ZNF143 GTRD no Epithelial (MCF-7) 108213890
chr16 85392632 85398764 ZNF143 GTRD no Epithelial (MCF-7) 21724056
chr16 85392632 85398764 ZNF143 GTRD no Epithelial (MCF-7) 108213891
chr16 85392632 85398764 ZNF143 GTRD no Epithelial (MCF-7) 108213892
chr16 85392632 85398764 ZNF143 GTRD no Epithelial (MCF-7) 108213893
chr16 85393605 85398636 TCF7L2 GTRD no Colon (HCT116) 108213908
chr16 85393605 85398636 TCF7L2 GTRD no Colon (HCT116) 108213909
chr16 85394211 85399199 ZNF143 GTRD no Epithelial (MCF-7) 21724135
chr16 85394211 85399199 ZNF143 GTRD no Epithelial (MCF-7) 108213910
chr16 85394211 85399199 ZNF143 GTRD no Epithelial (MCF-7) 108213911
chr16 85394211 85399199 ZNF143 GTRD no Epithelial (MCF-7) 108213912
chr16 85395276 85398925 ZNF274 GTRD no Bone Marrow (K562) 21724173
chr16 85395276 85398925 ZNF274 GTRD no Bone Marrow (K562) 108213967
chr16 85395276 85398925 ZNF274 GTRD no Bone Marrow (K562) 108213968
chr16 85395276 85398925 ZNF274 GTRD no Bone Marrow (K562) 108213969
chr16 85396416 85398708 ZNF143 GTRD no Epithelial (MCF-7) 21724192
chr16 85396416 85398708 ZNF143 GTRD no Epithelial (MCF-7) 108214000
chr16 85396416 85398708 ZNF143 GTRD no Epithelial (MCF-7) 108214001
chr16 85397128 85398534 ZNF274 GTRD no Bone Marrow (K562) 21724203
chr16 85397128 85398534 ZNF274 GTRD no Bone Marrow (K562) 108214015
chr16 85397164 85399214 ZNF143 GTRD no Epithelial (MCF-7) 21724206
chr16 85397164 85399214 ZNF143 GTRD no Epithelial (MCF-7) 108214020
chr16 85397164 85399214 ZNF143 GTRD no Epithelial (MCF-7) 108214021
chr16 85397168 85398449 ZNF274 GTRD no Bone Marrow (K562) 21724207
chr16 85397168 85398449 ZNF274 GTRD no Bone Marrow (K562) 108214023
chr16 85397405 85398582 ZNF274 GTRD no Cervix (HeLa-S3) 21724232
chr16 85397405 85398582 ZNF274 GTRD no Cervix (HeLa-S3) 108214082
chr16 85397469 85398637 TCF7L2 GTRD no Colon (HCT116) 108214099
chr16 85398118 85398500 ZNF274 GTRD no Bone Marrow (K562) 21724244
chr16 85398119 85398831 ZNF274 GTRD no Blood (GM12878) 108214112
chr16 85398171 85398786 ZNF274 GTRD no Blood (GM12878) 108214113
chr16 85398223 85398774 ZNF274 GTRD no Blood (GM12878) 108214114
chr16 85398295 85398306 E2F4 JASPAR yes 12052428
Genes associated with rs1466544[chr16:85398303], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More