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- rs146662339[chr1:220394160]
Enhancers that have rs146662339[chr1:220394160]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
220393912 |
220394294 |
vista5154 |
|
|
Transcript factors that have rs146662339[chr1:220394160]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
220393040
|
220394259
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
107870922
|
|
|
chr1
|
220393040
|
220394259
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
107870923
|
|
|
chr1
|
220393040
|
220394259
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870924
|
|
|
chr1
|
220393040
|
220394259
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870925
|
|
|
chr1
|
220393788
|
220394210
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107870967
|
|
|
chr1
|
220393803
|
220394278
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107870968
|
|
|
chr1
|
220393884
|
220394308
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107870969
|
|
|
chr1
|
220393913
|
220394253
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870970
|
|
|
chr1
|
220394039
|
220394475
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870971
|
|
|
chr1
|
220394152
|
220394161
|
JDP2
|
JASPAR
|
yes
|
|
118461072
|
|
|
chr1
|
220394157
|
220394175
|
IRF2
|
JASPAR
|
yes
|
|
118461073
|
|
|
chr1
|
220394159
|
220394172
|
SMAD2
|
JASPAR
|
yes
|
|
118461074
|
|
|
chr1
|
220394160
|
220394175
|
PRDM1
|
JASPAR
|
yes
|
|
118461075
|
|
|
chr1
|
220394160
|
220394175
|
STAT2
|
JASPAR
|
yes
|
|
118461076
|
|
Genes associated with rs146662339[chr1:220394160], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |