EnhancerDB
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  3. rs146713316[chr1:115969862]
Enhancers that have rs146713316[chr1:115969862]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 115966905 115976995 enh27090
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs146713316[chr1:115969862]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 115969439 115969976 TCF7L2 GTRD no Colon (HCT116) 21331029
chr1 115969599 115970223 ZNF143 GTRD no Epithelial (MCF-7) 21331030
chr1 115969655 115969945 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331031
chr1 115969686 115970153 ZNF143 GTRD no Epithelial (MCF-7) 21331032
chr1 115969857 115969863 GATA3 JASPAR yes 31735164
Genes associated with rs146713316[chr1:115969862], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More