EnhancerDB
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  3. rs146716052[chr1:38754455]
Enhancers that have rs146716052[chr1:38754455]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 38749381 38755528 enh66897
Muscle (A673) Neural Stem Cells (H9) Embryonic Stem Cell Line (H1-hESC)
Transcript factors that have rs146716052[chr1:38754455]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 38754453 38754463 POU6F2 JASPAR yes 28210502
chr1 38754454 38754464 ALX3 JASPAR yes 28210503
chr1 38754454 38754464 ESX1 JASPAR yes 28210504
chr1 38754454 38754464 GSX2 JASPAR yes 28210505
chr1 38754454 38754464 HESX1 JASPAR yes 28210506
chr1 38754454 38754464 LHX6 JASPAR yes 28210507
chr1 38754454 38754464 MIXL1 JASPAR yes 28210508
chr1 38754454 38754464 MNX1 JASPAR yes 28210509
chr1 38754454 38754464 NOTO JASPAR yes 28210510
chr1 38754454 38754464 RAX JASPAR yes 28210511
chr1 38754454 38754465 HOXA10 JASPAR yes 28210512
chr1 38754455 38754463 ISX JASPAR yes 28210513
chr1 38754455 38754463 LMX1A JASPAR yes 28210514
chr1 38754455 38754463 LMX1B JASPAR yes 28210515
chr1 38754455 38754463 NKX6-1 JASPAR yes 28210516
chr1 38754455 38754463 NKX6-2 JASPAR yes 28210517
chr1 38754455 38754463 PRRX1 JASPAR yes 28210518
chr1 38754455 38754463 RAX2 JASPAR yes 28210519
chr1 38754455 38754463 SHOX JASPAR yes 28210520
chr1 38754455 38754463 UNCX JASPAR yes 28210521
chr1 38754455 38754463 VAX1 JASPAR yes 28210522
Genes associated with rs146716052[chr1:38754455], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More