EnhancerDB
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  3. rs146782460[chr17:1979225]
Enhancers that have rs146782460[chr17:1979225]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 1972490 1982235 enh32047
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (Myoblast) Uterus Heart
chr17 1979194 1979509 vista23686
VISTA
Transcript factors that have rs146782460[chr17:1979225]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 1979004 1979274 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108229541
chr17 1979024 1979264 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108229542
chr17 1979140 1979612 ZNF274 GTRD no Bone Marrow (K562) 108229543
chr17 1979145 1979908 ZNF274 GTRD no Liver (HepG2) 108229544
chr17 1979188 1979293 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108229545
chr17 1979213 1979230 RARA JASPAR yes 21182939
chr17 1979213 1979230 RARA JASPAR yes 52720973
chr17 1979217 1979231 PLAG1 JASPAR yes 21182940
chr17 1979217 1979231 PLAG1 JASPAR yes 52720974
Genes associated with rs146782460[chr17:1979225], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More