EnhancerDB
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  3. rs146840895[chr1:42130529]
Enhancers that have rs146840895[chr1:42130529]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs146840895[chr1:42130529]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42130519 42130532 NFKB1 JASPAR yes 28407170
chr1 42130519 42130532 NFKB2 JASPAR yes 28407171
chr1 42130520 42130530 NFKB1 JASPAR yes 28407172
chr1 42130521 42130531 NFKB1 JASPAR yes 28407174
chr1 42130521 42130531 REL JASPAR yes 28407175
chr1 42130524 42130529 GATA2 JASPAR yes 28407176
chr1 42130524 42130540 RFX3 JASPAR yes 28407177
chr1 42130525 42130544 RFX2 JASPAR yes 28407178
chr1 42130526 42130532 MZF1 JASPAR yes 28407179
chr1 42130527 42130547 RREB1 JASPAR yes 28407180
Genes associated with rs146840895[chr1:42130529], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More