EnhancerDB
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  3. rs146896225[chr1:240562162]
Enhancers that have rs146896225[chr1:240562162]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 240559925 240567315 enh27667
Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Thyroid Muscle (Myotube) Uterus
Transcript factors that have rs146896225[chr1:240562162]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 240561869 240562853 ZNF274 GTRD no Cervix (HeLa-S3) 21404673
chr1 240561869 240562853 ZNF274 GTRD no Cervix (HeLa-S3) 107887247
chr1 240561910 240563001 ZNF274 GTRD no Liver (HepG2) 107887248
chr1 240562030 240562898 ZNF274 GTRD no Blood (GM12878) 107887249
chr1 240562152 240562163 HOXA10 JASPAR yes 36565057
chr1 240562153 240562163 EN2 JASPAR yes 36565058
chr1 240562153 240562163 ESX1 JASPAR yes 36565059
chr1 240562153 240562163 GBX1 JASPAR yes 36565060
chr1 240562153 240562163 GBX2 JASPAR yes 36565061
chr1 240562153 240562163 GSX2 JASPAR yes 36565062
chr1 240562153 240562163 HESX1 JASPAR yes 36565063
chr1 240562153 240562163 HOXB2 JASPAR yes 36565064
chr1 240562153 240562163 HOXB3 JASPAR yes 36565065
chr1 240562153 240562163 MEOX2 JASPAR yes 36565066
chr1 240562153 240562163 MNX1 JASPAR yes 36565067
chr1 240562153 240562163 RAX JASPAR yes 36565068
chr1 240562154 240562162 BARX1 JASPAR yes 36565069
chr1 240562154 240562162 BSX JASPAR yes 36565070
chr1 240562154 240562162 ISL2 JASPAR yes 36565071
chr1 240562154 240562162 LMX1B JASPAR yes 36565072
chr1 240562154 240562162 MSX1 JASPAR yes 36565073
chr1 240562154 240562162 MSX2 JASPAR yes 36565074
chr1 240562154 240562163 VENTX JASPAR yes 36565075
Genes associated with rs146896225[chr1:240562162], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More