EnhancerDB
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  3. rs147038527[chr1:42137290]
Enhancers that have rs147038527[chr1:42137290]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs147038527[chr1:42137290]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42137282 42137297 RUNX2 JASPAR yes 28408097
chr1 42137283 42137296 SCRT2 JASPAR yes 28408098
chr1 42137283 42137298 SCRT1 JASPAR yes 28408099
chr1 42137287 42137300 NR2F1 JASPAR yes 28408100
chr1 42137290 42137307 RARA JASPAR yes 28408101
Genes associated with rs147038527[chr1:42137290], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More