EnhancerDB
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  3. rs147405668[chr1:116861317]
Enhancers that have rs147405668[chr1:116861317]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs147405668[chr1:116861317]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116860701 116861752 AR GTRD no Prostate (PC-3) 21332147
chr1 116861115 116861647 ZNF274 GTRD no Bone Marrow (K562) 21332148
chr1 116861127 116861553 ZNF274 GTRD no Bone Marrow (K562) 21332149
chr1 116861164 116861478 ZNF274 GTRD no Bone Marrow (K562) 21332150
chr1 116861171 116861565 ZNF274 GTRD no Bone Marrow (K562) 21332151
chr1 116861311 116861325 RXRB JASPAR yes 31794067
chr1 116861311 116861325 RXRG JASPAR yes 31794068
chr1 116861311 116861326 NR2C2 JASPAR yes 31794069
chr1 116861313 116861328 SOX21 JASPAR yes 31794070
chr1 116861316 116861327 ESRRA JASPAR yes 31794071
Genes associated with rs147405668[chr1:116861317], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More