EnhancerDB
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  3. rs147472709[chr16:88539309]
Enhancers that have rs147472709[chr16:88539309]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88521345 88553535 enh4185
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Liver Blood (T-cell) Lung Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Thymus Heart
Transcript factors that have rs147472709[chr16:88539309]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88536250 88541434 TCF7L2 GTRD no Colon (HCT116) 21736506
chr16 88536250 88541434 TCF7L2 GTRD no Colon (HCT116) 108222374
chr16 88536250 88541434 TCF7L2 GTRD no Colon (HCT116) 108222375
chr16 88536250 88541434 TCF7L2 GTRD no Colon (HCT116) 108222376
chr16 88537003 88541599 TCF7L2 GTRD no Colon (HCT116) 21736511
chr16 88537003 88541599 TCF7L2 GTRD no Colon (HCT116) 108222393
chr16 88537003 88541599 TCF7L2 GTRD no Colon (HCT116) 108222394
chr16 88537003 88541620 ZNF143 GTRD no Epithelial (MCF-7) 21736512
chr16 88537003 88541620 ZNF143 GTRD no Epithelial (MCF-7) 108222395
chr16 88537003 88541620 ZNF143 GTRD no Epithelial (MCF-7) 108222396
chr16 88537015 88541479 ZNF143 GTRD no Epithelial (MCF-7) 21736514
chr16 88537015 88541479 ZNF143 GTRD no Epithelial (MCF-7) 108222398
chr16 88537015 88541479 ZNF143 GTRD no Epithelial (MCF-7) 108222399
chr16 88537038 88541533 ZNF143 GTRD no Epithelial (MCF-7) 21736516
chr16 88537038 88541533 ZNF143 GTRD no Epithelial (MCF-7) 108222401
chr16 88537038 88541533 ZNF143 GTRD no Epithelial (MCF-7) 108222402
chr16 88537053 88541508 ZNF143 GTRD no Epithelial (MCF-7) 21736518
chr16 88537053 88541508 ZNF143 GTRD no Epithelial (MCF-7) 108222405
chr16 88537053 88541508 ZNF143 GTRD no Epithelial (MCF-7) 108222406
chr16 88537077 88541461 TCF7L2 GTRD no Colon (HCT116) 21736519
chr16 88537077 88541461 TCF7L2 GTRD no Colon (HCT116) 108222407
chr16 88537077 88541461 TCF7L2 GTRD no Colon (HCT116) 108222408
chr16 88538918 88540771 TCF7L2 GTRD no Colon (HCT116) 21736530
chr16 88538918 88540771 TCF7L2 GTRD no Colon (HCT116) 108222427
chr16 88538997 88541407 TCF7L2 GTRD no Colon (HCT116) 21736531
chr16 88538997 88541407 TCF7L2 GTRD no Colon (HCT116) 108222428
chr16 88539184 88541555 ZNF143 GTRD no Epithelial (MCF-7) 21736532
chr16 88539184 88541555 ZNF143 GTRD no Epithelial (MCF-7) 108222429
chr16 88539305 88539310 SP1 TRANSFAC yes 12288336
chr16 88539306 88539311 SP1 TRANSFAC yes 12288337
chr16 88539306 88539312 SP1 TRANSFAC yes 12288338
chr16 88539309 88539328 REST JASPAR yes 12288339
Genes associated with rs147472709[chr16:88539309], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More