EnhancerDB
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  3. rs147928362[chr1:117006559]
Enhancers that have rs147928362[chr1:117006559]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs147928362[chr1:117006559]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117006406 117006742 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21332668
chr1 117006425 117006701 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21332669
chr1 117006550 117006560 GSC JASPAR yes 31809130
chr1 117006551 117006559 OTX2 JASPAR yes 31809131
chr1 117006559 117006573 ATF7 JASPAR yes 31809132
chr1 117006559 117006573 BATF3 JASPAR yes 31809133
Genes associated with rs147928362[chr1:117006559], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More