EnhancerDB
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  3. rs148220040[chr19:14672279]
Enhancers that have rs148220040[chr19:14672279]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 14658964 14673635 enh5022
Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs148220040[chr19:14672279]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 14672275 14672294 REST JASPAR yes 112579628
chr19 14672277 14672292 TFAP2A JASPAR yes 112579629
chr19 14672279 14672294 TFAP2A JASPAR yes 112579630
chr19 14672279 14672294 TFAP2C JASPAR yes 112579631
Genes associated with rs148220040[chr19:14672279], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More